Dr. Md. Ismail Hosen

Tamanna Sultana, Sadia Islam Mou, Dipankor Chatterjee, Md. Omar Faruk and Md. Ismail Hosen : Computational exploration of SLC14A1 genetic variants through structure modeling, protein-ligand docking, and molecular dynamics simulation, Biochemistry and Biophysics Reports , vol.38 , pp.101703 , 2024 .

Safayat Mahmud Khan, Tonmoy Das, Sajib Chakraborty, Abdul Matin Anamur Rashid Choudhury, Howlader Fazlul Karim, Munshi Akid Mostofa, Hasib Uddin Ahmed, Md Akmal Hossain, Florence {Le Calvez-Kelm}, Md Ismail Hosen and Hossain Uddin Shekhar : A transcriptome study of p53-pathway related prognostic gene signature set in bladder cancer, Heliyon , vol.9 , no.10 , pp.e21058 , 2023 .

Mukta Rani Sarkar, Md Harun-or Rashid, Aminur Rahman, Md Abdul Kafi, Md Ismail Hosen and Md Shahidur Rahman, M Nuruzzaman Khan : Recent advances in nanomaterials based sustainable agriculture: An overview, Environmental Nanotechnology, Monitoring & Management , vol.18 Elsevier , pp.100687 , 2022 .

Pakmanesh, H.; Anvari, O.; Forey, N.; Weiderpass, E.; Malekpourafshar, R.; Iranpour, M.; Shahesmaeili, A.; Ahmadi, N.; Bazrafshan, A.; Zendehdel, K.; Kannengiesser, C.; Ba, I.; McKay, J.; Zvereva, M., Hosen M.I. and Sheikh, M.; Calvez-Kelm, F.L. : TERT Promoter Mutations as Simple and Non-Invasive Urinary Biomarkers for the Detection of Urothelial Bladder Cancer in a High-Risk Region, Int. J. Mol. Sci. (impact factor:6.2) , vol.23 MDPI , pp.14319 , 2022 .

Sadniman Rahman, Md Asaduzzaman Shishir, Md Ismail Hosen and Miftahul Jannat Khan, Ashiqul Arefin, Ashfaqul Muid Khandaker : The status and analysis of common mutations found in the SARS-CoV-2 whole genome sequences from Bangladesh, Gene Reports , vol.27 Elsevier , pp.101608 , 2022 .

Atoll Goswami, Nafiul Huda, Tahirah Yasmin, Md. Ismail Hosen and A. K. M. Mahbub Hasan, A. H. M. Nurun Nabi : Association study of leukocyte telomere length and genetic polymorphism within hTERT promoter with type 2 diabetes in Bangladeshi population, Molecular Biology Reports , 2021 .

Md. Kamrul Hasan, Mohammad Kamruzzaman, Omar Hamza, Bin Manjur, Araf Mahmud, Nazmul Hussain, Muhammad Shafiul Alam Mondal, Md. Ismail Hosen and Martiniano Bello, Atiqur Rahman : Structural analogues of existing anti-viral drugs inhibit SARS-CoV-2 RNA dependent RNA polymerase: A computational hierarchical investigation, Heliyon , vol.7 , no.3 , 2021 .

Maisha Adiba,Tonmoy Das, Anik Paul, Ashish Das, Sajib Chakraborty, Md Ismail Hosen and A.H.M. Nurun Nabi : In silico characterization of coding and non-coding SNPs of the Androgen Receptor gene, Informatics in Medicine Unlocked , 2021 .

Jobaida Akther, Ashish Das, Md Arifur Rahman, Sajoy Kanti Saha, Md Ismail Hosen, Akio Ebihara, Tsutomu Nakagawa, Fumiaki Suzuki and A. H. M. Nurun Nabi : Non-coding Single Nucleotide Variants of Renin and the (Pro)renin Receptor are Associated with Polygenic Diseases in a Bangladeshi Population, Biochemical Genetics , 2021 .

Hasan MM, Sarker MSA, Nazir KNH, Rahman MB, Sarker MA, Hosen MI and Hasan MR, Nasrin T : Electronic Cigarettes (Vaping) preferences among University Students in Bangladesh, Int J Res Appl Sci Eng Technol. , pp.doi:10.22214/ijraset.2020.31357. , 2020 .

Md Ismail Hosen and Sheikh, Mahdi Zvereva, Maria Scelo, Ghislaine Forey, Nathalie Durand, Geoffroy Voegele, Catherine Poustchi, Hossein Khoshnia, Masoud Roshandel, Gholamreza Sotoudeh, Masoud Nikmanesh, Arash Etemadi, Arash Avogbe, Patrice Hodonou Chopard, Priscilia Delhomme, Tiffany Myriam Foll, Matthieu Manel, Arnaud Vian, Emmanuel Weiderpass, Elisabete Kamangar, Farin Boffetta, Paolo Pharaoh, Paul D. Dawsey, Sanford M. Abnet, Christian C. Brennan, Paul McKay, James Malekzadeh, Reza Calvez-Kelm, Florence Le : Urinary TERT promoter mutations are detectable up to 10 years prior to clinical diagnosis of bladder cancer: Evidence from the Golestan Cohort Study, EBioMedicine (impact factor:6.80) , pp.102643. doi:10.1016/j.ebiom.2020.102643 , 2020 .

Bappy HMJA, Goswami A, Huda N,, Hosen MI and Nabi AHMN : Gender specific association of missense variant rs1805097 of IRS-2 and noncoding variant rs841853 of GLUT-1 genes with susceptibility to type 2 diabetes in Bangladeshi population, Gene Reports , pp.doi:10.1016/j.genrep.2020.100866 , 2020 .

Zvereva, M.; Pisarev, E., Hosen MI and Kisil, O.; Matskeplishvili, S.; Kubareva, E.; Kamalov, D.; Tivtikyan, A.; Manel, A.; Vian, E.; Kamalov, A.; Ecke, T.; Calvez-Kelm, F.L. : Activating Telomerase TERT Promoter Mutations and Their Application for the Detection of Bladder Cancer, International Journal of Molecular Sciences (impact factor:4.56) , vol.21 , pp.6034 , 2020 .

Hosen MI and Forey N, Durand G, et al. : Development of Sensitive Droplet Digital PCR Assays for Detecting Urinary TERT Promoter Mutations as Non-Invasive Biomarkers for Detection of Urothelial Cancer, Cancers , vol.12(12):E3541. doi: 10.3390/cancers12123541 , 2020 .

Saha SK, Akther J, Huda N, Yasmin T, Alam MS, Hosen MI and Hasan AKM M, Nabi AHMN : Genetic association study of C5178A and G10398A mitochondrial DNA variants with type 2 diabetes in Bangladeshi population, Meta Gene (impact factor:1.57) , vol.19 , no.February 2019 , pp.23-31 , 2019 .

Avogbe PH, Manel A, Vian E, Durand G, Forey N, Voegele C, Zvereva M, Hosen MI and Meziani S, De Tilly B, Polo G, Lole O, Francois P, Delhomme TM, Carreira C, Monteiro-Reis S, Henrique R, Abedi-Ardekani B, Byrnes G, Foll M, Weiderpass E, McKay J, Jeronimo C, Scelo G, Le Calvez-Kelm F : Urinary TERT promoter mutations as non-invasive biomarkers for the comprehensive detection of urothelial cance, EBioMedicine (impact factor:6.18) , vol.44 , pp.431-438 , 2019 .

Hossain S and Hosen MI : Dissecting the structural and functional impact of SNPs located in the spinal muscular atrophy associated gene SMN1 using in silico analysis, Gene Reports , vol.15 , pp.100388 , 2019 .

Sajib Chakraborty, Geoffroy Andrieux, A. M. Mahmudul Hasan, Musaddeque Ahmed, Md. Ismail Hosen, Tania Rahman, M. Anwar Hossain and Melanie Boerries : Harnessing the tissue and plasma lncRNA-peptidome to discover peptide-based cancer biomarkers, Scientific Reports , 2019 .

Hasan KN, Sufian A, Hosen MI and Mazumder AK, Khaleque A, Rahman M, Ahsan GU, Akhteruzzaman S : β-Thalassemia Caused by De novo Mutation in the β globin Gene Identified in Two Bangladeshi Families, J Blood Disord Transfus 9:408. DOI: 10.4172/2155-9864.1000408 (impact factor:1.00) , vol.9 , no.408 , 2018 .

Chakraborty S, Hosen MI and Ahmed M, and Shekhar HU : Onco-Multi-OMICS Approach: A New Frontier in Cancer Research, BioMed Research International (impact factor:2.58) , 2018 .

Huda N, Hosen MI and Yasmin T, Sarkar PK, Hasan AKMM, Nabi AHMN : Genetic variation of the transcription factor GATA3, not STAT4, is associated with the risk of type 2 diabetes in the Bangladeshi population, Plos One (impact factor:2.76) , vol.13(7): e0198507 , 2018 .

Parvin M, Jahan F, Sarkar PK, Howlader ZH, Nabi AHMN and Hosen MI : Functional polymorphism located in the microRNA binding site of the Insulin Receptor (INSR) Gene confers risk for Type 2 Diabetes Mellitus in Bangladesh, Biochemical Genetics (impact factor:1.93) , vol.57 , no.1 , pp.20-33 , 2018 .

Hossain R, Yasmin T, Hosen MI and Nabi AHMN : In silico identification of potential epitopes present in human adenovirus proteins for vaccine design and of putative drugs for treatment against viral infection, Journal of Immunological Methods (impact factor:2.19) , vol.455 , pp.55-70 , 2018 .

Begum K, Mannan MA, Sanyal M, Hosen MI and Chakraborty S, Shekhar HU : Molecular diagnostic approach prevails superior over conventional gel-electrophoresis method in detecting Sickle cell Anemia, Journal of Molecular Biomarkers & Diagnosis (impact factor:1.20) , vol.9 , no.2 , pp.2 , 2018 .

Hosen MI and Hasan MM, Hossain T, Majumder AK, Sufian A, Momtaz P, Akhteruzzaman S : STR Data for the AmpFlSTR SGM Plus Loci From Three Ethnic Populations of Bangladesh and Their Genetic Affinities With Other Populations, Bioresearch Communications (impact factor:0.98) , vol.4 , no.1 , pp.487-493 , 2018 .

Alam MS, Chakraborty S, Rahman T, Hosen MI and Paul A, Hasan AKMM, Hossain MA : Investigation of the potential association between Clustered regularly interspersed short palindromic repeats (CRISPR) and antibiotic resistance pattern of bacterial strains isolated from medical waste and environmental water, Open Journal of Medical Microbiology (impact factor:0.87) , vol.8 , no.2 , pp.13-25 , 2018 .

Heidenreich B, Denisova E, Rachakonda S, Sanmartin, O, Dereani, T, Hosen MI and Nagore E, and Kumar R : Genetic alterations in seborrheic keratoses, Oncotarget (impact factor:5.17) , vol.8 , pp.36639-36649 , 2017 .

Hossain T, Kamruzzaman M, Choudhury TZ, Mahmood HN, Nabi AHMN and Hosen MI : Application of the Subtractive Genomics and Molecular Docking Analysis for the Identification of Novel Putative Drug Targets against Salmonella enterica subsp. enterica serovar Poona, BioMed Research International (impact factor:2.58) , 2017 .

Sufian, A., Hosen, M.I. and Fatema, K., Hossain, T., Hasan, M.M., Mazumder, A.K., Akhteruzzaman S : Genetic diversity study on 12 X-STR loci of investigator(R) Argus X STR kit in Bangladeshi population, (impact factor:2.32) , vol.131 , no.4 , pp.963-965 , 2017 .

Vijayakrishnan, J., Kumar, R., Henrion, M.Y., Moorman, A.V., Rachakonda, P.S., Hosen MI and da Silva Filho, M.I., Holroyd, A., Dobbins, S.E., Koehler R. et al : A genome-wide association study identifies risk loci for childhood acute lymphoblastic leukemia at 10q26.13 and 12q23.1, Leukemia (impact factor:10.02) , vol.31 , pp.573–579 , 2017 .

Akther, J., Ebihara, A., Nakagawa, T., Islam, L.N., Suzuki, F, Hosen MI and Hossain, M., Nabi AHM : Analyses of Genetic Variations of Glutathione S-Transferase Mu1 and Theta1 Genes in Bangladeshi Tannery Workers and Healthy Controls, Biomed Research International (impact factor:2.58) , 2016 .

Denisova, E., Heidenreich, B., Nagore, E., Rachakonda, P.S.,, Hosen MI and Akrap, I., Traves, V., Garcia-Casado, Z., Lopez-Guerrero, J.A., Requena C et al : Frequent DPH3 promoter mutations in skin cancers, Oncotarget (impact factor:5.17) , vol.6 , pp.35922-35930 , 2015 .

Hasan M, Momtaz P, Hosen MI and Das SA, Akhteruzzaman S : Population genetics of 17 Y-chromosomal STRs loci in Garo and Santal tribal populations in Bangladesh, International journal of legal medicine (impact factor:2.32) , vol.129 , no.2 , pp.251-252 , 2015 .

Heidenreich B, Rachakonda PS, Hosen MI and Volz F, Hemminki K, Weyerbrock A, Kumar R : TERT promoter mutations and telomere length in adult malignant gliomas and recurrences, Oncotarget (impact factor:5.17) , vol.6 , pp.10617-10633 , 2015 .

Hosen MI and Rachakonda PS, Heidenreich B, de Verdier PJ, Ryk C, Steineck G, Hemminki K, Kumar R : Mutations in TERT promoter and FGFR3 and telomere length in bladder cancer, International Journal of Cancer (impact factor:7.36) , vol.137 , pp.1621-1629 , 2015 .

Hosen MI and Rachakonda PS, Heidenreich B, Sitaram RT, Ljungberg B, Roos G, Hemminki K, Kumar R : TERT promoter mutations in clear cell renal cell carcinoma, International Journal of Cancer (impact factor:7.36) , vol.136 , pp.2448-2452 , 2015 .

Simon M, Hosen MI and Gousias K, Rachakonda PS, Heidenreich B, Gessi M, Schramm J, Hemminki K, Waha A, Kumar R : TERT promoter mutations: a novel independent prognostic factor in primary glioblastomas, Neuro-Oncology (impact factor:10.09) , vol.17 , no.1 , pp.45-52 , 2015 .

Davies, J.R., Field, S., Randerson-Moor, J., Harland, M., Kumar, R., Anic, G.M., Nagore, E., Hansson, J., Hoiom, V, Hosen MI and Jonsson G, Gruis NA et al : An inherited variant in the gene coding for vitamin D-binding protein and survival from cutaneous melanoma: a BioGenoMEL study, Pigment Cell and Melanoma Research (impact factor:6.11) , vol.27 , no.2 , pp.234–243 , 2014 .

Hosen MI and Tanmoy AM., Mahbuba DA, Salma U, Nazim M, Islam MT, Akhteruzzaman S : Application of a subtractive genomics approach for in silico identification and characterization of novel drug targets in Mycobacterium tuberculosis F11, Interdisciplinary sciences, computational life sciences (impact factor:1.418) , vol.6 , no.1 , pp.48-56 , 2014 .

Akhteruzzaman S, Das SA, Hosen MI and Ferdous A : Genetic polymorphism of 30 InDel markers for forensic use in Bangladeshi population, Forensic Science International: Genetics Supplement Series (impact factor:5.64) , vol.4 , no.1 , pp.e348-e349 , 2013 .

Alam MM, Arifuzzaman M, Ahmad SM, Hosen MI and Rahman MA, Rashu R, Sheikh A, Ryan ET, Calderwood SB, Qadri F : Study of avidity of antigen-specific antibody as a means of understanding development of long-term immunological memory after Vibrio cholerae O1 infection, Clinical and vaccine immunology (impact factor:2.87) , vol.20 , pp.17-23 , 2013 .

Islam MR, Hosen MI and Zaman A, Islam MO : Structural, functional and molecular docking study to characterize GMI1 from Arabidopsis thaliana., Interdisciplinary sciences, computational life sciences (impact factor:1.418) , vol.5 , no.1 , pp.13-22 , 2013 .

Rachakonda PS, Hosen MI and de Verdier PJ, Fallah M, Heidenreich B, Ryk C, Wiklund NP, Steineck G, Schadendorf D, Hemminki K, Kumar R : TERT promoter mutations in bladder cancer affect patient survival and disease recurrence through modification by a common polymorphism, Proceedings of the National Academy of Sciences of the United States of America (impact factor:9.58) , vol.110 , no.43 , pp.17426-17431 , 2013 .

Rahman T, Hosen MI and Chakraborty S : A Rapid Glimpse on Typhoid Fever: An Updated Mini-Review, Journal of Life Medicine (impact factor:0.83) , vol.1 , no.3 , pp.83-92 , 2013 .

Arifuzzaman M, Rashu R, Leung DT, Hosen MI and Bhuiyan TR, Bhuiyan MS, Rahman MA, Khanam F, Saha A, Charles RC, LaRocque RC, Weil AA, Clements JD, Holmes RK, Calderwood SB, Harris JB, Ryan ET, Qadri F : Antigen-specific memory T cell responses after vaccination with an oral killed cholera vaccine in Bangladeshi children and comparison to responses in patients with naturally acquired cholera, Clinical and Vaccine Immunology (impact factor:2.87) , vol.19 , no.8 , pp.1304-1311 , 2012 .

Rahman T, Hosen MI and Islam MMT, Shekhar HU : Oxidative stress and human health, Advances in Bioscience and Biotechnology (impact factor:1.35) , vol.3 , no.7 , pp.23 pages , 2012 .

Noshin Nawar, Anik Paul, Hamida Nooreen Mahmood, AR-RAFI Md Faisal, Md Ismail Hosen and Hossain Uddin Shekhar : Structure analysis of deleterious nsSNPs in human PALB2 protein for functional inference, Bioinformation , vol.17 , no.3 , pp.424-438 , 2021 .

Hasib Uddin Ahmed, Anik Paul, Zimam Mahmud, Taibur Rahman and Md IsmailHosen : Comprehensive characterization of the single nucleotide polymorphisms located in the isocitrate dehydrogenase isoform 1 and 2 genes using in silico approach, Gene Reports , vol.24 , 2021 .

Abdullah Al Saba, Maisha Adiba, Piyal Saha, Md. Ismail Hosen and Sajib Chakraborty, A.H.M. Nurun Nabi : An in-depth in silico and immunoinformatics approach for designing a potential multi-epitope construct for the effective development of vaccine to combat against SARS-CoV-2 encompassing variants of concern and interest, Computers in Biology and Medicine (impact factor:4.589) , 2021 .

Akter S, Hossain S, Ali MA, Hosen MI and Shekhar HU : Comprehensive Characterization of the Coding and Non-Coding Single Nucleotide Polymorphisms in the Tumor Protein p63 (TP63) Gene Using In Silico Tools, Biomolecules (impact factor:4.879) , vol.1(11):1733 , 2021 .

Khan SM, Faisal ARM, Nila TA, Binti NN, Hosen MI and Shekhar HU : A computational in silico approach to predict high-risk coding and non-coding SNPs of human PLCG1 gene, (impact factor:3.24) , vol.16(11): e0260054 PLOS ONE , 2021 .